SubtiBank SubtiBank
yvgL [2019-06-12 10:10:17]
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yvgL [2019-06-12 10:10:17]

similar to [SW|ABC transporter] for molybdenum uptake (binding protein)
locus
BSU33380
pI
5.10
mw
28.21 kDa
protein length
260 aa Sequence Blast
gene length
783 bp Sequence Blast
function
unknown
product
[SW|ABC transporter] (binding protein)
essential
no
synonyms
yvsD
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.6|Uptake of ions]
  • [category|SW 1|Cellular processes] → [category|SW 1.3|Homeostasis] → [category|SW 1.3.2|Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo)] → [category|SW 1.3.2.4|Trace metals/ Other]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    3,425,272 3,426,054

    The protein

    Structure

  • [PDB|2H5Y] (from Xanthomonas citri, 33% identity) [pubmed|16511325]

    • Expression and Regulation

    Operons

    genes
    [gene|7DCC368C52FB0DA12D807919CFEB49E2625932D3|yvgL]-[gene|D45E06B22749CD1127C07152515F5EF795B420FF|yvgM]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B063 (yvgL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1062 NBRP B. subtilis, Japan]
  • BKE33380 ([gene|7DCC368C52FB0DA12D807919CFEB49E2625932D3|yvgL]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATTGCACCCCTTATCA, downstream forward: _UP4_GAAGCAATGAAAGTATTTGA
  • BKK33380 ([gene|7DCC368C52FB0DA12D807919CFEB49E2625932D3|yvgL]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33380 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATTGCACCCCTTATCA, downstream forward: _UP4_GAAGCAATGAAAGTATTTGA

    • References

  • 10092453,16511325